People at NBCR

Administration | NCRR | RAC | Core 1 |  Core 2 | Core 3 | Core 4 | Core 5 | Others
Administration
Peter Arzberger, Ph.D.
 
Principal Investigator / Director, NBCR
Chair, PRAGMA Steering Committee
University of California, San Diego
UC 402/SDSC 351
9500 Gilman Drive, MC 0043
La Jolla, CA 92093-0043

parzberg@ucsd.edu

858-822-1079 (voice)
858-822-4767 (fax)
More Info (url)
Wilfred W. Li, Ph.D
.

Executive Director, NBCR
San Diego Supercomputer Center
University of California, San Diego
Atkinson Hall 3101
9500 Gilman Drive, MC 0505
La Jolla, CA 92093-0505
wilfred@sdsc.edu
858-822-0974 (voice)
858-822-0861 (fax)
More Info (url)

Teri Simas
Analyst, NBCR
Program Manager, PRAGMA
University of California, San Diego
9500 Gilman Drive, MC 0505
Atkinson Hall, Room 6404
La Jolla, CA 92093-0505
simast@sdsc.edu
858-534-5034 (voice)
858-534-5033 (fax)
Nora Makhsudova   Fund Manager
Neurosciences Department
BSB Room : 1000
9500 Gilman Drive
La Jolla, CA 92093-0608
nora@ncmir.ucsd.edu
858-534-0276 (voice)
858-534-7497 (fax
)
Funding Agency
Mike Marron, Ph.D.
NIH-NCRR
Biotech Division
Director
One Democracy Plaza, Room 962
6701 Democracy Boulevard, MSC 4874
Bethesda, Maryland 20892-4874
marronm@mail.nih.gov
310-435-0753 (voice)
310-480-3659 (fax)
More Info (url)
Olga Brazhnik, Ph.D.
NIH-NCRR
Biotech Division
One Democracy Plaza, MSC4874
6701 Democracy Boulevard, MSC 4874
Bethesda, Maryland 20892-4874
brazhnik@mail.nih.gov

310-435-0755 (voice)
310-480-3775 (fax)


Resource Advisory Committee
John Wooley, Ph.D.
RAC Chairperson
Associate Vice Chancellor of Research
OGSR, UC700
9500 Gilman Drive
La Jolla, CA 92093-0043
jwooley@ucsd.edu  
858-822-3604 (voice)
858-822-3630 (fax
)
More Info (url)
Chandrajit Bajaj, Ph.D. Chandra Bajaj
Department of Computer Sciences & the Institute of Computational Engineeringing and Sciences,
Professor

Center for Computational Visualiazation
University of Texas, Austin
1 University Station, C0200
Austin, TX 78712-0027

bajaj@cs.utexas.edu
512-471-8870 (voice)
512-471-0982 (fax
)
More Info (url)
Alan Blatecky, Ph.D.
Renaissance Computing Institute
Deputy Director

Suite 540
100 Europa Drive
Chapel Hill, NC 27517

alan@renci.org
919-445-9643 (voice)
919-445-9640 (fax
)
More Info (url)
Scott L. Delp , Ph.D.

Professor, Bioengineering Dept
Co-Director, Center for Biomedical Computation
School of Medicine, Stanford University

Stanford, CA

delp@stanford.edu
650-723-1230 (voice)
650-725-8544 (fax
)

Paul Gilna, Ph.D.

RAC Vice Chairperson
Calit2
UCSD, La Jolla CA 92093

pgilna@ucsd.edu
858-534-1901 (voice)
858-822-4633 (fax
)
Peter Hunter, Ph.D.
Bioengineering Institute
Professor, Director
University of Auckland
Private Bag 92019
Level 6, 70 Symonds St
Auckland, New Zealand

p.hunter@auckland.ac.nz
+64 9 -373-7599 X 88395(voice) +64 9 -367-7157(fax)

More Info (url)
Leslie Loew, Ph.D.
Professor
Dept Cell Biology
Director, Center for Biomedical Imaging Technology
University of Connecticut Health Center
Farmington, CT 06030
les@volt.uchc.edu  
860-679-3568 (voice)
860-679-1269 (fax
)
More Info (url)
Wilma K. Olson, Ph.D.
Mary I. Bunting Professor of Chemistry
Rutgers University, Piscataway
Chemistry & Chemical Biology
610 Taylor Road, Piscataway, NJ 08854

olson@rutchem.rutgers.edu  
732-445-3993 (voice)
732-445-5958 (fax
)
More Info (url)
Shinji Shimojo, Ph.D.
Director, Cybermedia Center
Professor
Osaka University

5-1 Mihogaoka, Ibaraki
Osaka 567-0047, Japan

shimojo@cmc.osaka-u.ac.jp  
+ 81 6-6879-8794 (voice)
+ 81 6-6850-6589 (fax
)
More Info (url)
Administration | NCRR | RAC | Core 1 |  Core 2 | Core 3 | Core 4 | Core 5 | Others
Core 1: Integrative Modeling of subcellular Processes: Application to Synaptic Activity and Pharmaceutical Discovery
J. Andrew McCammon, Ph.D. 

 

Core Lead
Joseph E. Mayer Professor, Department of Chemistry and Biochemistry Professor
Department of Pharmacology
Department of Chemistry & Biochemistry
Investigator, Howard Hughes Medical Institute

University of California, San Diego
4216 Urey Hall
9500 Gilman Drive, 0365
La Jolla, CA 92093-0365
jmccammon@ucsd.edu
858-534-2905 (voice)
858-534-7042 (fax)
Patti Craft Administrative Assistant: 4238 Urey Hall
858-534-2905 (voice)
858-734-7042 (fax)
pcraft@mccammon.ucsd.edu
Rommie Amaro, Ph.D.   Department of Chemistry and Biochemistry
9500 Gilman Dr.
La Jolla, CA 92093
ramaro@mccammon.ucsd.edu
Jacob Durrant

 

Department of Chemistry and Biochemistry
9500 Gilman Dr.
La Jolla, CA 92093
jacob@mccammon.ucsd.edu
Robert Konecny, Ph.D.   Department of Chemistry and Biochemistry
Urey Hall 2214
9500 Gilman Dr.
La Jolla, CA 92093-0365
rok@ucsd.edu
838-822-5683 (voice)
858-534-7042 (fax)
Core 2: Multiscale Model Building and Visualization Tools
Michael Holst, Ph.D.

 

Core Lead
Professor, Department of Mathematics
University of California, San Diego
5739 Applied Physics and Mathematics Building
9500 Gilman Drive, 0112
La Jolla, CA 92093-0112
mholst@ucsd.edu
858-534-4899 (voice)
858-534-5273 (fax)
Nathan A. Baker, Ph.D.

 

Associate Professor
Washington University in St. Louis
School of Medicine
Dept. of Biochemistry and Molecular Biophysics
Center for Computational Biology
700 S. Euclid Ave., Campus Box 8036, St. Louis, MO 63110
314-362-2040 (voice)
314-362-0234 (fax)
baker@biochem.wustl.edu
PGP key:
http://cholla.wustl.edu/~baker/pubkey.asc
Zeyun Yu, Ph.D.  

Department of Mathematics
5739 Applied Physics and Mathematics Building
9500 Gilman Drive, 0112
La Jolla, CA 92093-0112
zeyun@cam.ucsd.edu
858-534-4899 (voice)
858-534-5273 (fax)

Anouchka Mihaylova, Ph.D. Assistant Research Scientist
University of California, San Diego
9500 Gilman Drive, 0427
La Jolla, CA 92093-0427
amihaylova@ucsd.edu
858-822-4872 (voice)
Yuhui Cheng   Department of Chemistry and Biochemistry
9500 Gilman Dr.
La Jolla, CA 92093
ycheng@mccammon.ucsd.edu
Rick Lawrence, Ph.D.   CRBS
SDSC 353
9500 Gilman Drive, MC 0505
La Jolla, CA 92093-0505
lawrence@sdsc.edu

858-822-0894 (voice)
858-822-0861 (fax)
Sebastien Phan, Ph.D.   CRBS
SDSC 353
9500 Gilman Drive, MC 0505
La Jolla, CA 92093-0505
lawrence@sdsc.edu

858-822-0894 (voice)
858-822-0861 (fax)
Administration | NCRR | RAC | Core 1 |  Core 2 | Core 3 | Core 4 | Core 5 | Others
Core 3: Structurally and Functionally Integrated Modeling of Cell and Organ Biophysics
Andrew McCulloch, Ph.D. 
Core Lead
Professor & Chair, Department of Bioengineering
231 Powell-Focht Bioengineering Hall
University of California, San Diego
9500 Gilman Drive, MC 0412
La Jolla, CA 92093-0412

amcculloch@ucsd.edu

858-534-2547 (voice)
858-534-6896 (fax)
Faculty Assistant: Robbie Gandy   858-822-4997 (voice)
858-534-5722 (fax)
Room 231 Powell-Focht Bioengineering Hall
rgandy@bioeng.ucsd.edu
Roy Kerckhoffs, Ph.D.   Department of Bioengineering
University of California, San Diego
9500 Gilman Drive, 0427
La Jolla, CA 92093-0427
Fred Lionetti   Department of Bioengineering
University of California, San Diego
9500 Gilman Drive, 0427
La Jolla, CA 92093-0427
Ankur Jain   Department of Bioengineering
PFBH 243
University of California, San Diego
9500 Gilman Drive, 0427
La Jolla, CA 92093-0427
Adam Wright   Department of Bioengineering
PFBH 243
University of California, San Diego
9500 Gilman Drive, 0427
La Jolla, CA 92093-0427
Core 4: Visualization Environments for Multi-Scale Biomedical Modeling
Michel Sanner, Ph.D.

Core Lead
Associate Professor,
Department of Molecular Biology

The Scripps Research Institute, MB5
10550 North Torrey Pines Road
La Jolla, CA 92037
sanner@scripps.edu
858-784-2341 (voice)
858-784-2860 (fax)

Arthur J. Olson, Ph.D.   
Professor, Department of Molecular Biology
The Scripps Research Institute, MB5
10550 North Torrey Pines Road
La Jolla, CA 92037
olson@scripps.edu
858-784-9702 (voice)
858-784-2860 (fax)
Senior Administrative Assistant: Peggy Graber  
858-784-2526 (voice)
858-784-2860 (fax)
graber@scripps.edu
Sargis Dallakyan, Ph.D.
 
The Scripps Research Institute
Department of Molecular Biology
Room MB112/Mail Drop MB5
10550 North Torrey Pines Road
La Jolla, CA 92037
(858) 784-9559 (voice)
(858) 784-2860 (fax)
sargis@scripps.edu
Ruth Huey, Ph.D.   The Scripps Research Institute
Department of Molecular Biology
Room MB112/Mail Drop MB5
10550 North Torrey Pines Road
La Jolla, CA 92037
(858) 784-2334 (voice)
(858) 784-2860 (fax)
rhuey@scripps.edu
Anna Omelchenko   The Scripps Research Institute
Department of Molecular Biology
Room MB112/Mail Drop MB5
10550 North Torrey Pines Road
La Jolla, CA 92037
(858) 784-2292(voice)
(858) 784-2860 (fax)
annao@scripps.edu
Guillaume Vareille   The Scripps Research Institute
Department of Molecular Biology
Room MB112/Mail Drop MB5
10550 North Torrey Pines Road
La Jolla, CA 92037
(858) 784-2292(voice)
(858) 784-2860 (fax)
vareille@scripps.edu
Administration | NCRR | RAC | Core 1 |  Core 2 | Core 3 | Core 4 | Core 5 | Others
Core 5: Grid Computing and Analysis for Multi-Scale Biomedical Applications
Philip M. Papadopoulos, Ph.D.
Program Director, Grid and Cluster Computing, Core Lead
Co-PI, PRAGMA
San Diego Supercomputer Center
University of California, San Diego
9500 Gilman Drive, MC 0505
La Jolla, CA 92093-0505
phil
@sdsc.edu
858-822-3628 (voice)
858-822-5407 (fax)
Mark Ellisman, Ph.D.
Professor, Department of Neurosciences
University of California, San Diego
3032 Basic Sciences Building
9500 Gilman Drive, MC 0608
La Jolla, CA 92093-0608
mhellisman@ucsd.edu
858-534-2251 (voice)
Administrative Specialist: Grace Osborne   858-534-0276 (voice)
858-534-7497 (fax)
gosborne@ncmir.ucsd.edu
Sriram Krishnan, Ph.D.
San Diego Supercomputer Center
SDSC 305
9500 Gilman Drive, MC 0505
La Jolla, CA 92093-0505
sriram@sdsc.edu

858-822-5425(voice)
858-822-0861 (fax)
Jane Ren, MS   CRBS/SDSC
SDSC 362
9500 Gilman Dr.
La Jolla, CA 92093
j2ren@ucsd.edu
(858) 246-0336 (voice)
(858) 822-0861 (fax)
Luca Clementi, MS   CRBS/SDSC
Atkinson 1000
9500 Gilman Drive, MC 0440
La Jolla, CA 92093-0440
clem@sdsc.edu

858-246-0336 (voice)
858-822-0861 (fax)
Dong Xu, Ph.D.
Calit2
Atkinson 1000
9500 Gilman Drive, MC 0440
La Jolla, CA 92093-0440
d1xu@ucsd.edu

858-534-0587 (voice)
858-822-0861 (fax)

  Administration | NCRR | RAC | Core 1 |  Core 2 | Core 3 | Core 4 | Core 5 | Others
Collaborative Projects NBCR has more than 10 collaborative projects in Universities  across the United States.
Service Projects NBCR research and development enables a number of related projects as examples of biomedical community service.

This Resource is supported by the National Institutes of Health (NIH) through a National Center for Research Resources program grant (P 41 RR08605) to researchers at the University of California, San Diego, including the San Diego Supercomputer Center (SDSC), the California Institute of Telecommunications and Information Technology (Calit2), The Center for Research in Biological Systems (CRBS), The Scripps Research Institute (TSRI), and Washington University in St. Louis (WUSTL).


National Center
for Research Resources

National Biomedical Computation Resource
University of California, San Diego
9500 Gilman Drive, MC 0440 - La Jolla, CA 92093-0440
Phone: (858) 534-5079 - Fax: (858) 534-5033
Email Us


National Institutes
of Health