BrownDye This software toolkit uses Brownian dynamics to simulate association reactions of biomolecules. It can be used to estimate second-order rate constants of association and transition probabilities among binding sites.
Acknowledgment: National Institutes of Health, National Science Foundation, Howard Hughes Medical Institute, Center for Theoretical Biological Physics at UCSD
Please acknowledge the use of NBCR software: "This project was supported by grants from the National Center for Research Resources (5P41RR008605-19) and the National Institute of General Medical Sciences (P41 GM103426) from the National Institutes of Health"
BrownDye Citation: [bibtex]